What to do about NFS and SIGBUS(rachelbythebay.com)
rachelbythebay.com
What to do about NFS and SIGBUS
https://rachelbythebay.com/w/2018/03/18/nfs/
18 comments
On the other hand, I've run multi-hundred-node HPC stateless HPC clusters long term off an (rpm-based) NFS root with little trouble once I could get the cluster vendors out of the picture. Places like the Tri-Labs appear to -- or have done? -- with larger systems, even if they need something like https://computation.llnl.gov/projects/spindle at scale. What flattened NFS wasn't executables but i/o of data files, BLAST being the worst offender; staging those in array jobs was definitely worthwhile.
I strongly prefer the trades-off of stateless systems in that context, though I might prefer to do it off a parallel filesystem, and clearly your kilometreage varies. [From experience ~10 years ago, I'd say avoid GPFS more than NFS, but doubtless it's improved, and I hold no brief for NFS.]
I strongly prefer the trades-off of stateless systems in that context, though I might prefer to do it off a parallel filesystem, and clearly your kilometreage varies. [From experience ~10 years ago, I'd say avoid GPFS more than NFS, but doubtless it's improved, and I hold no brief for NFS.]
I've found that even for unix-unix, samba is just more reliable with more reasonable error behaviour.
To me samba has just too much magic, especially when mixing unix, OSX and windows clients.
magic is just technology we don't understand. I use cifs over nfs as well.
With excel locking, os x trashes, etc.? What good configuration guide would you suggest for a mixed Linux, OS X and Windows environment with MS Office?
This magic only solves have the problems
This magic only solves have the problems
fruit:resource = xattr
fruit:metadata = netatalk
fruit:locking = none
fruit:encoding = private
delete veto files = yes
veto files = /.snapshot/.windows/.mac/.TemporaryItems/.DS_Store[deleted]
rsync, ln -s, mv -T always worked for me -- NFS always presents so many problems, I almost never deploy it anymore given copies of everything are so cheap via various cloud storage solutions.
Previous post for context: https://rachelbythebay.com/w/2018/03/15/core/
As a developer and operator of a distributed file system, and specifically one that might have caused Rachel some pain, I kind of agree with her. If you can run with local code and data, do so. Even if you think you can't, think again. Only run from data on the servers if you have no choice, e.g. if the dataset is too large to copy or you need simultaneous access (better be read-only by that point) from multiple clients. Not only will you be happier, but so will the people who have to operate that distributed filesystem in the face of many users all abusing the hell out of every operation in the POSIX/VFS API.
My favorite NFS story: many many years ago (mid 90s) I was part of the staff for a physics department's IT group. At the time, affordable Alpha workstations had just started appearing on the market, while most users still relied on "semi-dumb" X Terminals/thin clients. Everything was attached to our 10Base2 network, capable of a BLAZING 10Mb/s.
We started seeing weird whole-display freezes on bunches of the X Terminals one day. It took a while to correlate that these happened at the same time one of the newly-installed Alphas in a far-off office was doing a lot of file I/O over NFS - saturating the entire coax segment and freezing the displays...
IIRC the "upgrade to 100BaseT" project got scooted WAY up on the priority list right after that. :)
We started seeing weird whole-display freezes on bunches of the X Terminals one day. It took a while to correlate that these happened at the same time one of the newly-installed Alphas in a far-off office was doing a lot of file I/O over NFS - saturating the entire coax segment and freezing the displays...
IIRC the "upgrade to 100BaseT" project got scooted WAY up on the priority list right after that. :)
Back in the 90s, before package managers for Linux/BSD and when disk drives were fairly pricey, it was common to have say, a network of commercial *nix workstations with nfs mounted binaries for stuff like gcc, latex, emacs, X utilities, etc.
This was typically done by a network of symlinks. As best I can remember, you'd have /opt/local exported from the server, with all the open source goodies. It was arranged something like
/opt/local/emacs-19.1.7/bin/emacs
/opt/local/emacs-19.1.8/bin/emacs
/opt/local/emacs -> /opt/local/emacs-19.1.7
<....>
All the clients would have a local /usr/local with another symlink, /usr/local/bin/emacs pointing at /opt/local/emacs/bin/emacs
When you upgraded from 19.1.7 to 19.1.8, you'd just move the symlink on the server. You'd then wait a week or two, and garbage collect the old version (after rsh'ing around to the clients to make sure none had the old version open, if your users were lucky).
The local network of symlinks into /opt/local was maintained by something like cfengine, which ran at install and nightly to update configs (eg, for newly supported stuff, or new binaries in new versions of existing software).
If you screwed this up, and replaced a binary out from under a user, they were rather unhappy..
This was typically done by a network of symlinks. As best I can remember, you'd have /opt/local exported from the server, with all the open source goodies. It was arranged something like
/opt/local/emacs-19.1.7/bin/emacs
/opt/local/emacs-19.1.8/bin/emacs
/opt/local/emacs -> /opt/local/emacs-19.1.7
<....>
All the clients would have a local /usr/local with another symlink, /usr/local/bin/emacs pointing at /opt/local/emacs/bin/emacs
When you upgraded from 19.1.7 to 19.1.8, you'd just move the symlink on the server. You'd then wait a week or two, and garbage collect the old version (after rsh'ing around to the clients to make sure none had the old version open, if your users were lucky).
The local network of symlinks into /opt/local was maintained by something like cfengine, which ran at install and nightly to update configs (eg, for newly supported stuff, or new binaries in new versions of existing software).
If you screwed this up, and replaced a binary out from under a user, they were rather unhappy..
There was actually a tool for managing such symlink trees, “depot” from CMU:
https://www.cs.cmu.edu/~help/unix_linux/software_collections...
https://www.cs.cmu.edu/~help/unix_linux/software_collections...
Interesting - I wonder if that inspired GNU Stow (similar tool I often see used for managing dotfiles)
The CMU depot was presented at LISA '93:
http://static.usenix.org/publications/library/proceedings/li...
Stow apparently started development in 1996 and was initially named depot:
http://git.savannah.gnu.org/cgit/stow.git/tree/doc/ChangeLog...
So probably?
http://static.usenix.org/publications/library/proceedings/li...
Stow apparently started development in 1996 and was initially named depot:
http://git.savannah.gnu.org/cgit/stow.git/tree/doc/ChangeLog...
So probably?
NFS has plenty of good uses. Maildir works fine, sharing large datasets works fine, sharing static assets works fine, it's widely supported. No need to throw the baby out with the bathwater. Just stop putting the baby in boiling water.
NFS is a way to share files, not provide a reliable application platform. There are lots of options you can enable to make it more stable, but it simply isn't designed as an application platform, so it's all going to be hacks.
And keep in mind that NFS is not secure. Supposedly it can be secured, but I have never seen this in a production environment. Running an application over it is just a bad idea from a security standpoint. Home directories over it are a terrible idea from both a security and stability standpoint.
Finally, don't try to change a file and expect stability. If you need a new version of a file with some change to it, make a new file and use that new file path.
NFS is a way to share files, not provide a reliable application platform. There are lots of options you can enable to make it more stable, but it simply isn't designed as an application platform, so it's all going to be hacks.
And keep in mind that NFS is not secure. Supposedly it can be secured, but I have never seen this in a production environment. Running an application over it is just a bad idea from a security standpoint. Home directories over it are a terrible idea from both a security and stability standpoint.
Finally, don't try to change a file and expect stability. If you need a new version of a file with some change to it, make a new file and use that new file path.
Except CIFS proves it is possible to have a network file protocol that isn’t quite such hot garbage
I'm not saying there aren't good network filesystems, I'm just saying that while NFS is hot garbage, it is totally useful hot garbage when used in the right way.
Even before that, in a supercomputing context (2002-), when writing MPI "wrapper" software that would be used on end-user clusters with all kinds of unfortunate network setups, I avoided a lot of trouble by copying the executable to the local node before running it.
This isn't a new issue. And the traditional solutions work.