alias rm='trash -i'
It will prompt you before moving files to the trash instead of deleting them straight away on macOS. alias mv='mv -i -v'
alias cp='cp -i -v'
alias ln='ln -i -v'
It warns me when a file might be overwritten in the target directory and will display a short protocol of the actions performed due to the 'verbose' flag.
As a seemingly overly visual thinker the aspect of making several small decisions about how to layout what I'm writing down by hand also seems to play a huge role in that. I have to make positioning and thereby spacing and sizing decisions, choose the color, as well as making decisions on in what style (caps, cursive, script) I write each letter. I can easily use graphical elements like lines, arrows, boxes, etc.
Anything created digitally by primarily typing will always have a more dynamic and flowing nature, while following the linearity of the typed sequence of characters. It takes away a lot of the decisions that I have to make when laying out a handwritten note.
Anecdotally, I seem to remember mindmaps created with digital tools that rearrange elements automatically based on available space much less than hand-drawn ones. Yet, those come with their own downsides.