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dddiaz1

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Analyzing my own genome with DRAGEN and Claude

dddiaz.com
1 points·by dddiaz1·6 месяцев назад·1 comments

Enabling Rapid Genomic Analysis with Illumina Dragen on Amazon EC2 F2 Instances

aws.amazon.com
1 points·by dddiaz1·12 месяцев назад·0 comments

Genomic Adventures: Exploring the Genetic Roots of My Type 1 Diabetes in My DNA

dddiaz.com
1 points·by dddiaz1·2 года назад·0 comments

Installing my own open source pancreas

dddiaz.com
1 points·by dddiaz1·3 года назад·0 comments

Halloween Spooktacular: Fog Machine Madness

blog.apartment304.com
3 points·by dddiaz1·3 года назад·0 comments

Illumina Complete Long Reads software analysis workflow

illumina.com
1 points·by dddiaz1·3 года назад·0 comments

The Amgen vs. Sanofi Decision and Bite-Sized Monopolies

patentlyo.com
2 points·by dddiaz1·3 года назад·0 comments

comments

dddiaz1
·6 месяцев назад·discuss
https://dddiaz.com/

Blog about Genomics, Type 1 Diabetes, and Life.
dddiaz1
·2 года назад·discuss
Great to see it be OTC. But it's weird that it is advertised to last for 15 days, while the prescription version for T1ds/T2ds only lasts for 10 days. The hardware looks the same.
dddiaz1
·2 года назад·discuss
Very Cool!

I also have T1D and its a natural source for cool software engineering projects like this.

You might like these two posts: Using machine learning to predict when I excercised: https://dddiaz.com/post/glucose-datascience/

Using Genomic Software to explore my auto-immune genes: https://dddiaz.com/post/hla/
dddiaz1
·3 года назад·discuss
If you are interested in genomics, some other reads I recommend:

The Gene: An intimate history. An incredible retelling of how we discovered the gene, from Mendel and his pea plants to next generation sequencing. https://www.amazon.com/Gene-Intimate-History-Siddhartha-Mukh...

The Genome Odyssey A series of patient stories documenting the process of using genomics to diagnose and treat rare diseases in patients https://www.amazon.com/dp/1250234980

The author of this article, nick lane also has some popular bio books, in particular: Transformers, The deep chemistry of life. https://www.amazon.com/Transformer-Deep-Chemistry-Life-Death...
dddiaz1
·3 года назад·discuss
Another really cool use case for FPGAs is for ultra fast analysis of genomic data. This guide walks you through setting up an F1 instance (AWS FPGA) to do that: https://aws-quickstart.github.io/quickstart-illumina-dragen/