I wish people would stop saying "atomic commits" and start saying "main/master is stable", because that's what they actually mean. Every git commit is atomic, by definition... But people want every single possible revision to be green and buildable, which is different, and has nothing to do with git. I don't think it makes sense (tags are a lot more helpful for marking what is and isn't stable), but hey.
Do you always make all of your logical code changes in single, atomic commits? What if you have to modify a feature later on? I'm sorry, but this is ridiculous. There's nothing wrong with having multiple commits in a row modifying something. That's how git works. GitHub's PR merge workflow really messed up the meta game, I tell you what...