The ML Engineer's Guide to Protein AI(huggingface.co)
huggingface.co
The ML Engineer's Guide to Protein AI
https://huggingface.co/blog/MaziyarPanahi/protein-ai-landscape
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The 2024 Nobel Prize in Chemistry went to the creators of AlphaFold, a deep learning system that solved a 50-year grand challenge in biology. The architectures behind it (transformers, diffusion models, GNNs) are the same ones you already use. This post maps the protein AI landscape: key architectures, the open-source ecosystem (which has exploded since 2024), and practical tool selection. Part II (coming soon) covers how I built my own end-to-end pipeline.